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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853218.1_cds_XP_016512172.1_24840
CDS Infomation

[gene=LOC107829217] [db_xref=GeneID:107829217] [protein=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like] [protein_id=XP_016512172.1] [location=complement(join(47478..47711,56491..56621,57724..58054))] [gbkey=CDS]
Sequence

ATGGCTATGGCGTCCTCACTATTCATTTCAACTCCATTCCCATCTAAACCGATCTCTAAA
CAAATACCTTTTTCTTTTCCCTCTTCAAATCCTCTAATACGTTCGTTTACCCACAAACCC
TCGAGGAATTTGGTGGTTTCTTCTTCTGCAGCTGCAACAAATGCAATTGAAGCTGAAACA
CAAACATCTAACTCTGCTACTACTCCAGCAAAGTCACTTTCTTTTAGAGTTGGTCATGGA
TTTGACCTTCATAGATTGGAACCGGGGTATCCATTGATTATTGGTGGGATTAATATTCCT
CATGATAGAGGCTGTGAAGCTCACTCGGATGGTGATGTTTTGCTTCATTGTGTTGTTGAT
GCAATTTTGGGAGCTTTGGGGCTTCCTGATATCGGGCAGATTTTCCCGGACACTGATCCT
AAATGGAAGGGTGCGCCTTCTTCGGTATTCATGGAAGAAGCTGTGCGTCTAATGCATGAA
GCAGGTTATGAATTGGGAAACCTCGACGCCACTTTGATTCTACAAAGACCAAAAGTGAGC
CCGCACAAGGAGGCAATTAGAGCCAACTTGTGTAAGCTGCTTGGTGCCGATCCATCTGTT
GTAAACTTGAAAGCAAAAACTCATGAGAAAGTTGACAGTCTCGGAGAGAACAGAAGTATT
GCTGCTCATACTGTAGTTCTTCTTATGAAAAAATAG

Peptide Sequence

PEP ID

XP_016512172.1
PEP Infomation

PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAMASSLFISTPFPSKPISKQIPFSFPSSNPLIRSFTHKPSRNLVVSSSAAATNAIEAET
QTSNSATTPAKSLSFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVD
AILGALGLPDIGQIFPDTDPKWKGAPSSVFMEEAVRLMHEAGYELGNLDATLILQRPKVS
PHKEAIRANLCKLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMKK

Transcript Sequence

Gene sequence data has not been registered.